Red-legged partridge ( Alectoris rufa ) de-novo transcriptome assembly and identification of gene-related markers
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چکیده
منابع مشابه
Red-legged partridge (Alectoris rufa) de-novo transcriptome assembly and identification of gene-related markers
The red-legged partridge (Alectoris rufa) has a great socio-economic importance as a game species and is reared by millions in farms in several European countries. The ability to respond to a wide spectrum of pathogens and environmental changes is key for farm-reared animals that, as such, face even higher pathogen exposure and specifically for those submitted to restocking programs. In this st...
متن کاملEggshell Thickness Variation in Red-legged Partridge (Alectoris rufa) from Spain
—Eggshell thickness is commonly used as an indicator of habitat quality and effects of environmental pollution on avian reproduction. We present the first data available on eggshell thickness for Red-legged Partridge (Alectoris rufa) in Spain. We compared eggshell thickness between eggs collected in an agricultural area (wild eggs) and eggs from game farms (farm eggs). Wild eggs had shells sign...
متن کاملEffects of housing type and breeding system on the reproductive capacity of the red-legged partridge (Alectoris rufa).
Current methods of intensive breeding of the red-legged partridge (Alectoris rufa) are based on "industrial" laying practices, including removal and artificial incubation of eggs. These procedures can alter the reproductive behavior and physiology of the birds and, therefore, may not be suitable for use in breeding programs designed to increase wild populations. This study aimed to determine th...
متن کاملPathogenesis and transmissibility of highly (H7N1) and low (H7N9) pathogenic avian influenza virus infection in red-legged partridge (Alectoris rufa)
An experimental infection with highly pathogenic avian influenza virus (HPAIV) and low pathogenic avian influenza virus (LPAIV) was carried out in red-legged partridges (Alectoris rufa) in order to study clinical signs, gross and microscopic lesions, and viral distribution in tissues and viral shedding. Birds were infected with a HPAIV subtype H7N1 (A/Chicken/Italy/5093/1999) and a LPAIV subtyp...
متن کاملClustering of Short Read Sequences for de novo Transcriptome Assembly
Given the importance of transcriptome analysis in various biological studies and considering thevast amount of whole transcriptome sequencing data, it seems necessary to develop analgorithm to assemble transcriptome data. In this study we propose an algorithm fortranscriptome assembly in the absence of a reference genome. First, the contiguous sequencesare generated using de Bruijn graph with d...
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ژورنال
عنوان ژورنال: Genomics Data
سال: 2017
ISSN: 2213-5960
DOI: 10.1016/j.gdata.2017.02.003